In silico prediction and ex vivo evaluation of potential T-cell epitopes in glycoproteins 4 and 5 and nucleocapsid protein of genotype-I (European) of porcine reproductive and respiratory syndrome virus

Vaccine. 2009 Sep 18;27(41):5603-11. doi: 10.1016/j.vaccine.2009.07.029. Epub 2009 Jul 29.

Abstract

T-cell epitopes of porcine reproductive and respiratory syndrome virus (PRRSV) glycoproteins 4 (GP4), 5 (GP5) and nucleocapsid (N) were predicted using bioinformatics and later tested by IFN-gamma ELISPOT in pigs immunized with either a modified live vaccine (MLV) or DNA (open reading frames 4, 5 or 7). For MLV-vaccinated pigs, immunodominant epitopes were found in N but T-epitopes were also found in GP4 and GP5. For DNA-immunized pigs, some peptides were differently recognized. Using a large set of PRRSV sequences it was shown that N contains a conserved epitope and that for GP5, the genotype-I counterparts of previously reported epitopes of genotype-II strains were also immunogenic.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Computational Biology
  • Epitopes, T-Lymphocyte / genetics*
  • Epitopes, T-Lymphocyte / immunology*
  • Interferon-gamma / metabolism
  • Leukocytes, Mononuclear / immunology
  • Nucleocapsid Proteins / genetics*
  • Nucleocapsid Proteins / immunology*
  • Porcine respiratory and reproductive syndrome virus / genetics
  • Porcine respiratory and reproductive syndrome virus / isolation & purification*
  • Swine
  • Vaccines, Attenuated / immunology
  • Vaccines, DNA / immunology
  • Viral Envelope Proteins / genetics*
  • Viral Envelope Proteins / immunology*

Substances

  • Epitopes, T-Lymphocyte
  • Nucleocapsid Proteins
  • Vaccines, Attenuated
  • Vaccines, DNA
  • Viral Envelope Proteins
  • Interferon-gamma