Proteomic evaluation of wound-healing processes in potato (Solanum tuberosum L.) tuber tissue

Proteomics. 2009 Sep;9(17):4154-75. doi: 10.1002/pmic.200700649.

Abstract

Proteins from potato (Solanum tuberosum L.) tuber slices, related to the wound-healing process, were separated by 2-DE and identified by an MS analysis in MS and MS/MS mode. Slicing triggered differentiation processes that lead to changes in metabolism, activation of defence and cell-wall reinforcement. Proteins related to storage, cell growth and division, cell structure, signal transduction, energy production, disease/defence mechanisms and secondary metabolism were detected. Image analysis of the 2-DE gels revealed a time-dependent change in the complexity of the polypeptide patterns. By microscopic observation the polyalyphatic domain of suberin was clearly visible by D4, indicating that a closing layer (primary suberisation) was formed by then. A PCA of the six sampling dates revealed two time phases, D0-D2 and D4-D8, with a border position between D2 and D4. Moreover, a PCA of differentially expressed proteins indicated the existence of a succession of proteomic events leading to wound-periderm reconstruction. Some late-expressed proteins (D6-D8), including a suberisation-associated anionic peroxidase, have also been identified in the native periderm. Despite this, protein patterns of D8 slices and native periderm were still different, suggesting that the processes of wound-periderm formation are extended in time and not fully equivalent. The information presented in this study gives clues for further work on wound healing-periderm formation processes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Electrophoresis, Gel, Two-Dimensional
  • Gene Expression Profiling
  • Mass Spectrometry
  • Peptides / chemistry
  • Plant Diseases*
  • Plant Proteins / analysis
  • Plant Proteins / chemistry
  • Plant Tubers / cytology
  • Plant Tubers / metabolism*
  • Principal Component Analysis
  • Proteomics*
  • Solanum tuberosum / cytology
  • Solanum tuberosum / metabolism*

Substances

  • Peptides
  • Plant Proteins