Molecular identification of enteroviruses including two new types (EV-98 and EV-107) isolated from Japanese travellers from Asian countries

J Gen Virol. 2010 Apr;91(Pt 4):1063-6. doi: 10.1099/vir.0.016014-0. Epub 2009 Dec 2.

Abstract

Of 58 enterovirus strains isolated from Japanese travellers returning from Asian countries, eight were non-serotypable with existing antisera. By sequencing a part of the VP1 region, six of these strains were typed as echovirus 9, enterovirus (EV)-73, EV-79 or EV-97. The nucleotide identity of the VP1 region of isolate T92-1499 to all enterovirus prototypes was <70 %. The VP1 sequence of isolate TN94-0349 was closely related to coxsackievirus (CV)-A9 (73.3 % nucleotide identity), but the virus could not be neutralized with a serum raised against the prototype CV-A9 strain. On the basis of complete molecular comparisons, T92-1499 and TN94-0349 were identified as EV-98 and EV-107, respectively, by the ICTV Picornavirus Study Group. Serum neutralization tests of Japanese individuals revealed a seroprevalence rate of 11 % for EV-73, and even lower seroprevalence rates, 1.0-3.8 %, were found for the other new enteroviruses, suggesting that prior circulation of these viruses in Japan was unlikely.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Amino Acid Sequence
  • Antibodies, Viral / blood
  • Base Sequence
  • Child
  • Child, Preschool
  • Enterovirus / classification*
  • Enterovirus / genetics
  • Enterovirus / immunology
  • Humans
  • Infant
  • Japan
  • Molecular Sequence Data
  • Neutralization Tests
  • Travel*

Substances

  • Antibodies, Viral

Associated data

  • GENBANK/AB426608
  • GENBANK/AB426609
  • GENBANK/AB426610
  • GENBANK/AB426611
  • GENBANK/AB426612
  • GENBANK/AB426613
  • GENBANK/AB426614
  • GENBANK/AB426615