NMR assignments of the DNA binding domain of Ml4 protein from Mesorhizobium loti

Biomol NMR Assign. 2010 Apr;4(1):55-7. doi: 10.1007/s12104-009-9206-0. Epub 2009 Dec 19.

Abstract

Ml4 protein from Mesorhizobium loti has a 58% sequence identity with the Ros protein from Agrobacterium tumefaciens that contains a prokaryotic Cys(2)His(2) zinc finger domain. Interestingly, Ml4 is a zinc-lacking protein that does not contain the Cys(2)His(2) motif and is able to bind the Ros DNA target sequence with high affinity. Here we report the (1)H, (15)N and (13)C NMR assignments of the Ml4 protein DNA binding domain (residue 52-151), as an important step toward elucidating at a molecular level how this prokaryotic domain can overcome the metal requirement for proper folding and DNA-binding activity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alphaproteobacteria / chemistry*
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Carbon Isotopes / chemistry
  • DNA-Binding Proteins / chemistry*
  • DNA-Binding Proteins / genetics
  • Hydrogen / chemistry
  • Nitrogen Isotopes / chemistry
  • Nuclear Magnetic Resonance, Biomolecular
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics

Substances

  • Bacterial Proteins
  • Carbon Isotopes
  • DNA-Binding Proteins
  • Nitrogen Isotopes
  • Recombinant Proteins
  • Hydrogen