Automated pancreas segmentation from three-dimensional contrast-enhanced computed tomography

Int J Comput Assist Radiol Surg. 2010 Jan;5(1):85-98. doi: 10.1007/s11548-009-0384-0. Epub 2009 Jul 18.

Abstract

Purpose: We propose an automated pancreas segmentation algorithm from contrast-enhanced multiphase computed tomography (CT) and verify its effectiveness in segmentation.

Methods: The algorithm is characterized by three unique ideas. First, a two-stage segmentation strategy with spatial standardization of pancreas was employed to reduce variations in the pancreas shape and location. Second, patient- specific probabilistic atlas guided segmentation was developed to cope with the remaining variability in shape and location. Finally, a classifier ensemble was incorporated to refine the rough segmentation results.

Results: The effectiveness of the proposed algorithm was validated with 20 unknown CT volumes, as well as three on-site CT volumes distributed in a competition of pancreas segmentation algorithms. The experimental results indicated that the segmentation performance was enhanced by the proposed algorithm, and the Jaccard index between an extracted pancreas and a true one was 57.9%.

Conclusions: This study verified the effectiveness of two-stage segmentation with spatial standardization of pancreas in delineating the pancreas region, patient-specific probabilistic atlas guided segmentation in reducing false negatives, and a classifier ensemble in boosting segmentation performance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Diagnosis, Computer-Assisted / instrumentation*
  • Humans
  • Image Processing, Computer-Assisted / instrumentation*
  • Imaging, Three-Dimensional
  • Pancreas / diagnostic imaging*
  • Radiographic Image Enhancement
  • Tomography, X-Ray Computed*