Molecular characterization of sewage-borne pathogens and detection of sewage markers in an urban stream in Caracas, Venezuela

Appl Environ Microbiol. 2010 Mar;76(6):2023-6. doi: 10.1128/AEM.02752-09. Epub 2010 Jan 22.

Abstract

Molecular characterization of two sewage-borne pathogens identified hepatitis A virus (HAV) subgenotype IA and Giardia duodenalis assemblages A and B as predominant genotypes circulating in an urban area of Venezuela. This study reveals epidemiological features of human pathogens of worldwide distribution and the efficacy of molecular methods for accurate assessment of sewage pollution.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cities
  • Cluster Analysis
  • Giardia / classification
  • Giardia / genetics
  • Giardia / isolation & purification*
  • Hepatitis A virus / classification
  • Hepatitis A virus / genetics
  • Hepatitis A virus / isolation & purification*
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Rivers / parasitology*
  • Rivers / virology*
  • Sequence Analysis, DNA
  • Sequence Homology
  • Sewage / parasitology*
  • Sewage / virology*
  • Venezuela
  • Water Pollution*

Substances

  • Sewage

Associated data

  • GENBANK/GQ253432
  • GENBANK/GQ253433
  • GENBANK/GQ253434
  • GENBANK/GQ253435
  • GENBANK/GQ253436
  • GENBANK/GQ253437
  • GENBANK/GQ253438
  • GENBANK/GU189565
  • GENBANK/GU189566
  • GENBANK/GU189567
  • GENBANK/GU189568
  • GENBANK/GU189569
  • GENBANK/GU189570
  • GENBANK/GU189571
  • GENBANK/GU189572
  • GENBANK/GU189573
  • GENBANK/GU189574
  • GENBANK/GU189575