CHOYCE: a web server for constrained homology modelling with cryoEM maps

Bioinformatics. 2010 Jul 1;26(13):1673-4. doi: 10.1093/bioinformatics/btq237. Epub 2010 May 5.

Abstract

Summary: CHOYCE is a web server for homology modelling of protein components and the fitting of those components into cryo electron microscopy (cryoEM) maps of their assemblies. It provides an interactive approach to improving the selection of models based on the quality of their fit into the EM map.

Availability: http://choyce.ismb.lon.ac.uk/

Contact: [email protected]; [email protected]

Supplementary information: Supplementary data are available at Bioinformatics online.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cattle
  • Computational Biology / methods*
  • Cryoelectron Microscopy*
  • Electron Transport Complex IV / chemistry
  • Models, Molecular*
  • Proteins / chemistry*
  • Receptors for Activated C Kinase
  • Receptors, Cell Surface / chemistry
  • Saccharomyces cerevisiae / chemistry
  • Sequence Homology, Amino Acid
  • Software

Substances

  • Proteins
  • Receptors for Activated C Kinase
  • Receptors, Cell Surface
  • Electron Transport Complex IV