Solution NMR characterization of Sgf73(1-104) indicates that Zn ion is required to stabilize zinc finger motif

Biochem Biophys Res Commun. 2010 Jul 2;397(3):436-40. doi: 10.1016/j.bbrc.2010.05.118. Epub 2010 May 27.

Abstract

Zinc finger motif contains a zinc ion coordinated by several conserved amino acid residues. Yeast Sgf73 protein was identified as a component of SAGA (Spt/Ada/Gcn5 acetyltransferase) multi-subunit complex and Sgf73 protein was known to contain two zinc finger motifs. Sgf73(1-104), containing the first zinc finger motif, was necessary to modulate the deubiquitinase activity of SAGA complex. Here, Sgf73(1-104) was over-expressed using bacterial expression system and purified for solution NMR (nuclear magnetic resonance) structural studies. Secondary structure and site-specific relaxation analysis of Sgf73(1-104) were achieved after solution NMR backbone assignment. Solution NMR and circular dichroism analysis of Sgf73(1-104) after zinc ion removal using chelation reagent EDTA (ethylene-diamine-tetraacetic acid) demonstrated that zinc ion was required to maintain stable conformation of the zinc finger motif.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Circular Dichroism
  • Edetic Acid
  • Enzyme Stability
  • Histone Acetyltransferases / chemistry*
  • Histone Acetyltransferases / genetics
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Structure, Secondary
  • Saccharomyces cerevisiae / enzymology*
  • Solutions
  • Zinc / chemistry*
  • Zinc Fingers*

Substances

  • Solutions
  • Edetic Acid
  • Histone Acetyltransferases
  • Sgf73 protein, S cerevisiae
  • Zinc