Multinuclear NMR study of the structure of the Fv fragment of anti-dansyl mouse IgG2a antibody

Biochemistry. 1991 Jul 2;30(26):6611-9. doi: 10.1021/bi00240a034.

Abstract

A multinuclear NMR study is reported of Fv, which is a minimum antigen-binding unit of immunoglobulin. Fv has been prepared by clostripain digestion of a mouse anti-dansyl IgG2a monoclonal antibody that lacks the entire CH1 domain [Takahashi, H., Igarashi, T., Shimada, I., & Arata, Y. (1991) Biochemistry 30, 2840-2847]. A variety of Fv analogues labeled with 2H in the aromatic rings and with 13C and/or 15N in the peptide bonds have been prepared and used for multinuclear NMR analyses of Fv in the absence and presence of epsilon-dansyl-L-lysine (DNS-Lys). It has been shown that 1H-15N shift correlation spectra of Fv sensitively reflect the antigen binding and can be used along with 1H and 13C spectral data for the structural analyses of antigen-antibody interactions. Hydrogen-deuterium exchange of the amide protons has been followed in the absence and presence of DNS-Lys by using the 1H-15N shift correlation spectra. Use of the beta-shift observed for the carbonyl carbon resonances has also been helpful in following the hydrogen-deuterium exchange. On the basis of the NMR data obtained, the static and dynamic structure of the Fv fragment in the absence and presence of DNS-Lys has been discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antibodies, Monoclonal / chemistry*
  • Binding Sites, Antibody*
  • Dansyl Compounds*
  • Dipeptides / analysis
  • Immunoglobulin Fragments*
  • Immunoglobulin G / chemistry*
  • Immunoglobulins / chemistry*
  • Magnetic Resonance Spectroscopy / methods
  • Mice
  • Molecular Sequence Data
  • Protein Conformation
  • Recombinant Proteins / chemistry*
  • Tyrosine

Substances

  • Antibodies, Monoclonal
  • Dansyl Compounds
  • Dipeptides
  • Immunoglobulin Fragments
  • Immunoglobulin G
  • Immunoglobulins
  • Recombinant Proteins
  • immunoglobulin Fv
  • Tyrosine