Frequency factors in a landscape model of filamentous protein aggregation

Phys Rev Lett. 2010 Jun 4;104(22):228101. doi: 10.1103/PhysRevLett.104.228101. Epub 2010 Jun 1.

Abstract

Using quantitative measurements of protein aggregation rates, we develop a kinetic picture of protein conversion from a soluble to a fibrillar state which shows that a single free energy barrier to aggregation controls the addition of protein molecules into amyloid fibrils, while the characteristic sublinear concentration dependence emerges as a natural consequence of finite diffusion times. These findings suggest that this reaction does not follow a simple chemical mechanism, but rather operates in a way analogous to the landscape models of protein folding defined by stochastic dynamics on a characteristic energy surface.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amyloid / chemistry*
  • Amyloid / metabolism*
  • Kinetics
  • Models, Biological*
  • Protein Folding
  • Protein Multimerization*
  • Protein Structure, Quaternary
  • Solubility
  • Stochastic Processes
  • Thermodynamics

Substances

  • Amyloid