Identification and characterization of human PCDH10 gene promoter

Gene. 2011 Apr 1;475(1):49-56. doi: 10.1016/j.gene.2011.01.001. Epub 2011 Jan 13.

Abstract

Recent studies have suggested roles for PCDH10 as a novel tumor suppressor gene. In our previous work, we located the core promoter of PCDH10 to a 462-bp segment of 5'-flanking region characterized by a high GC content. Here we further identified and characterized the promoter for PCDH10. Transient transfection of PC3 and LNCaP cells with a series of deleted promoter constructs indicated that the minimal promoter region was between nucleotides -144 and -99. This segment contained a CAAT box, a GT box, and a putative transcription factor binding site for AP-4. Mutational analysis identified that the CAAT box and GT box are necessary for promoter activity. Ectopic expression of NF-Ys increased reporter gene activity, whereas expression of a dominant-negative NF-YA decreased reporter gene activity. Co-transfection of Sp1/Sp3 expression plasmids enhanced reporter gene activity in a dose-dependent manner. Mithramycin A, an inhibitor of Sp-DNA interaction, reduced PCDH10 promoter activity. Electrophoretic mobility shift assays and chromatin immunoprecipitation demonstrated binding of transcription factors Sp1/Sp3 to the promoter region in vitro and in vivo. Our data show that Sp1/Sp3 and CBF/NF-Y transcription factors play a crucial role in the basal expression of the human PCDH10 gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • CCAAT-Binding Factor / metabolism
  • Cadherins / genetics*
  • Cell Line, Tumor
  • Chromatin Immunoprecipitation
  • DNA Mutational Analysis
  • Electrophoretic Mobility Shift Assay
  • Humans
  • Molecular Sequence Data
  • Promoter Regions, Genetic / genetics*
  • Protocadherins
  • Sp1 Transcription Factor / metabolism
  • Sp3 Transcription Factor / metabolism

Substances

  • CCAAT-Binding Factor
  • Cadherins
  • NFYA protein, human
  • PCDH10 protein, human
  • Protocadherins
  • Sp1 Transcription Factor
  • Sp3 Transcription Factor