A de novo 1.5 Mb microdeletion on chromosome 14q23.2-23.3 in a patient with autism and spherocytosis

Autism Res. 2011 Jun;4(3):221-7. doi: 10.1002/aur.186. Epub 2011 Feb 28.

Abstract

Autism is a neuro-developmental disorder characterized by deficits in social interaction and communication as well as restricted interests or repetitive behaviors. Cytogenetic studies have implicated large chromosomal aberrations in the etiology of approximately 5-7% of autism patients, and the recent advent of array-based techniques allows the exploration of submicroscopic copy number variations (CNVs). We genotyped a 14-year-old boy with autism, spherocytosis and other physical dysmorphia, his parents, and two non-autistic siblings with the Illumina Human 1M Beadchip as part of a study of the molecular genetics of autism and determined copy number variants using the PennCNV algorithm. We identified and validated a de novo 1.5 Mb microdeletion of 14q23.2-23.3 in our autistic patient. This region contains 15 genes, including spectrin beta (SPTB), encoding a cytoskeletal protein previously associated with spherocytosis, methylenetetrahydrofolate dehydrogenase 1 (MTHFD1), a folate metabolizing enzyme previously associated with bipoloar disorder and schizophrenia, pleckstrin homology domain-containing family G member 3 (PLEKHG3), a guanide nucleotide exchange enriched in the brain, and churchill domain containing protein 1 (CHURC1), homologs of which regulate neuronal development in model organisms. While a similar deletion has previously been reported in a family with spherocytosis, severe learning disabilities, and mild mental retardation, this is the first implication of chr14q23.2-23.3 in the etiology of autism and points to MTHFD1, PLEKHG3, and CHURC1 as potential candidate genes contributing to autism risk.

Publication types

  • Case Reports
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Alleles
  • Autistic Disorder / genetics*
  • Chromosome Deletion*
  • Chromosomes, Human, Pair 14 / genetics*
  • Comorbidity
  • DNA Copy Number Variations / genetics
  • Gene Frequency / genetics
  • Genetic Association Studies*
  • Genotype
  • Humans
  • Intellectual Disability / genetics
  • Learning Disabilities / genetics
  • Male
  • Methylenetetrahydrofolate Dehydrogenase (NADP) / genetics*
  • Minor Histocompatibility Antigens
  • Pedigree
  • Phenotype
  • Polymorphism, Single Nucleotide / genetics*
  • Spherocytosis, Hereditary / genetics*

Substances

  • Minor Histocompatibility Antigens
  • MTHFD1 protein, human
  • Methylenetetrahydrofolate Dehydrogenase (NADP)