Exploring the common molecular basis for the universal DNA mutation bias: revival of Löwdin mutation model

Biochem Biophys Res Commun. 2011 Jun 10;409(3):367-71. doi: 10.1016/j.bbrc.2011.05.017. Epub 2011 May 10.

Abstract

Recently, numerous genome analyses revealed the existence of a universal G:C→A:T mutation bias in bacteria, fungi, plants and animals. To explore the molecular basis for this mutation bias, we examined the three well-known DNA mutation models, i.e., oxidative damage model, UV-radiation damage model and CpG hypermutation model. It was revealed that these models cannot provide a sufficient explanation to the universal mutation bias. Therefore, we resorted to a DNA mutation model proposed by Löwdin 40 years ago, which was based on inter-base double proton transfers (DPT). Since DPT is a fundamental and spontaneous chemical process and occurs much more frequently within GC pairs than AT pairs, Löwdin model offers a common explanation for the observed universal mutation bias and thus has broad biological implications.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • DNA / chemistry
  • DNA / genetics*
  • Models, Genetic*
  • Mutation*
  • Protons

Substances

  • Protons
  • DNA