Multiplex isothermal helicase-dependent amplification assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae

Diagn Microbiol Infect Dis. 2011 Dec;71(4):354-65. doi: 10.1016/j.diagmicrobio.2011.08.021. Epub 2011 Oct 14.

Abstract

Thermophilic helicase dependent amplification (tHDA), which employs helicase to unwind double-stranded DNA at constant temperature, is a relatively new isothermal nucleic acid amplification technology. In this study, the development and optimization of a 4-plex tHDA assay for detection of Chlamydia trachomatis (CT) and Neisseria gonorrhoeae (NG) are described. tHDA is combined with sequence-specific sample preparation on magnetic beads and homogeneous endpoint fluorescence detection using dual-labeled probes. This 4-plex tHDA assay was applied to the detection of 2 genes on CT and a multicopy gene on NG in the presence of an internal control. The assay showed high analytical sensitivity and specificity of simultaneous CT/NG detection and is compatible with a wide variety of sample types and media. The isothermal reaction conditions and homogeneous endpoint detection utilized in this assay are well suited for laboratory automation and high-throughput screening applications as well as for point-of-care testing.

Publication types

  • Evaluation Study

MeSH terms

  • Bacteriological Techniques / methods
  • Chlamydia Infections / diagnosis*
  • Chlamydia Infections / microbiology
  • Chlamydia trachomatis / enzymology
  • Chlamydia trachomatis / genetics
  • Chlamydia trachomatis / isolation & purification*
  • DNA Helicases* / metabolism
  • Gonorrhea / diagnosis*
  • Gonorrhea / microbiology
  • Humans
  • Microspheres
  • Molecular Diagnostic Techniques / methods*
  • Neisseria gonorrhoeae / enzymology
  • Neisseria gonorrhoeae / genetics
  • Neisseria gonorrhoeae / isolation & purification*
  • Nucleic Acid Amplification Techniques / methods*
  • Oligonucleotide Probes / genetics
  • Point-of-Care Systems
  • Sensitivity and Specificity

Substances

  • Oligonucleotide Probes
  • DNA Helicases