Molecular typing of adenoviruses in pediatric respiratory infections in Buenos Aires, Argentina (1999-2010)

J Clin Virol. 2012 Feb;53(2):145-50. doi: 10.1016/j.jcv.2011.11.001. Epub 2011 Dec 3.

Abstract

Background: The human adenovirus (HAdV) types most commonly found in respiratory samples belong to HAdV species C (HAdV-C1, -C2, -C5, and -C6) and to HAdV species B (HAdV-B3 and -B7). Several studies in South America have shown the association between severe respiratory infections and subspecies B1.

Objectives: The aim of this study was to identify the adenovirus types associated with acute lower respiratory tract infections in children, found as single or coinfections, throughout a 12-year period.

Study design: All samples that tested positive for adenovirus by immunofluorescence assay from January 1999 to December 2010 were typed by evaluating a set of four viral genes (E1A, VA, hexon and fiber). Quantitative PCRs for HAdV-B and HAdV-C species were performed to compare the viral load found in single infections and coinfections.

Results: From a total of 743 HAdV, 654 (88%) were single infections and 89 (12%) coinfections. From the 654 single HAdV infections, members of four species were present: species B (n=492, 75.23%), species C (n=138, 21.1%), species E (n=19, 2.91%), and species D (n=5, 0.76%). Only members of species B (n=109, 57.67%) and species C (n=80, 42.33%) were detected in coinfections. HAdV-B7 and HAdV-B3 were the most prevalent types (n=308, 36.54%; n=230, 27.28% respectively) and HAdV-C1, -C2, -E4, -C5, -C6, -D8, -B11, -B14 and -B21 were also detected. Viral loads for species C viruses were higher in single infections than in coinfections (p<0.01), whereas the opposite was observed for species B viruses (p<0.0001).

Conclusions: This study provides a thorough description of adenovirus circulation and diversity in Buenos Aires in a 12-year period. The high proportion of coinfections found in this work shows that this phenomenom might be more common than expected.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenovirus Infections, Human / epidemiology*
  • Adenovirus Infections, Human / virology
  • Adenoviruses, Human / classification*
  • Adenoviruses, Human / genetics*
  • Adenoviruses, Human / isolation & purification
  • Adenoviruses, Human / physiology
  • Argentina / epidemiology
  • Cell Line
  • Child, Preschool
  • Coinfection / epidemiology
  • Coinfection / virology
  • DNA, Viral / analysis
  • Humans
  • Infant
  • Infant, Newborn
  • Molecular Typing
  • Polymerase Chain Reaction / methods
  • Respiratory Tract Infections / epidemiology*
  • Respiratory Tract Infections / virology
  • Sequence Analysis, DNA
  • Viral Load

Substances

  • DNA, Viral