Inhibition of HIV-1 infection by TNPO3 depletion is determined by capsid and detectable after viral cDNA enters the nucleus

Retrovirology. 2011 Dec 6:8:98. doi: 10.1186/1742-4690-8-98.

Abstract

Background: HIV-1 infects non-dividing cells. This implies that the virus traverses the nuclear pore before it integrates into chromosomal DNA. Recent studies demonstrated that TNPO3 is required for full infectivity of HIV-1. The fact that TNPO3 is a karyopherin suggests that it acts by directly promoting nuclear entry of HIV-1. Some studies support this hypothesis, while others have failed to do so. Additionally, some studies suggest that TNPO3 acts via HIV-1 Integrase (IN), and others indicate that it acts via capsid (CA).

Results: To shed light on the mechanism by which TNPO3 contributes to HIV-1 infection we engineered a panel of twenty-seven single-cycle HIV-1 vectors each bearing a different CA mutation and characterized them for the ability to transduce cells in which TNPO3 had been knocked down (KD). Fourteen CA mutants were relatively TNPO3-independent, as compared to wild-type (WT) HIV-1. Two mutants were more TNPO3-dependent than the WT, and eleven mutants were actually inhibited by TNPO3. The efficiency of the synthesis of viral cDNA, 2-LTR circles, and proviral DNA was then assessed for WT HIV-1 and three select CA mutants. Controls included rescue of TNPO3 KD with non-targetable coding sequence, RT- and IN- mutant viruses, and pharmacologic inhibitors of RT and IN. TNPO3 KD blocked transduction and establishment of proviral DNA by wild-type HIV-1 with no significant effect on the level of 2-LTR circles. PCR results were confirmed by achieving TNPO3 KD using two different methodologies (lentiviral vector and siRNA oligonucleotide transfection); by challenging three different cell types; by using two different challenge viruses, each necessitating different sets of PCR primers; and by pseudotyping virus with VSV G or using HIV-1 Env.

Conclusion: TNPO3 promotes HIV-1 infectivity at a step in the virus life cycle that is detectable after the preintegration complex arrives in the nucleus and CA is the viral determinant for TNPO3 dependence.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Capsid
  • Capsid Proteins / genetics*
  • Capsid Proteins / metabolism
  • Cell Line, Tumor
  • Cell Nucleus / virology*
  • DNA, Viral / biosynthesis
  • DNA, Viral / genetics
  • Gene Knockdown Techniques
  • HIV Infections / genetics
  • HIV Infections / metabolism*
  • HIV Infections / prevention & control
  • HIV Integrase / genetics
  • HIV Integrase / metabolism
  • HIV Long Terminal Repeat / genetics
  • HIV-1 / genetics
  • HIV-1 / physiology*
  • HeLa Cells
  • Humans
  • MicroRNAs
  • Mutation
  • Nuclear Envelope / virology
  • RNA Interference
  • RNA, Small Interfering
  • Reverse Transcriptase Inhibitors
  • Virus Integration
  • Virus Replication
  • beta Karyopherins / genetics*
  • beta Karyopherins / metabolism

Substances

  • Capsid Proteins
  • DNA, Viral
  • MicroRNAs
  • RNA, Small Interfering
  • Reverse Transcriptase Inhibitors
  • TNPO3 protein, human
  • beta Karyopherins
  • HIV Integrase
  • p31 integrase protein, Human immunodeficiency virus 1