Molecular epidemiology of Rift Valley fever virus

Emerg Infect Dis. 2011 Dec;17(12):2270-6. doi: 10.3201/eid1712.111035.

Abstract

Phylogenetic relationships were examined for 198 Rift Valley fever virus isolates and 5 derived strains obtained from various sources in Saudi Arabia and 16 countries in Africa during a 67-year period (1944-2010). A maximum-likelihood tree prepared with sequence data for a 490-nt section of the Gn glycoprotein gene showed that 95 unique sequences sorted into 15 lineages. A 2010 isolate from a patient in South Africa potentially exposed to co-infection with live animal vaccine and wild virus was a reassortant. The potential influence of large-scale use of live animal vaccine on evolution of Rift Valley fever virus is discussed.

MeSH terms

  • Animals
  • Base Sequence
  • Communicable Diseases, Emerging / epidemiology
  • Communicable Diseases, Emerging / veterinary
  • Communicable Diseases, Emerging / virology
  • DNA, Viral / genetics
  • Disease Outbreaks / veterinary
  • Genes, Viral
  • Humans
  • Molecular Epidemiology
  • Phylogeny
  • Recombination, Genetic
  • Rift Valley Fever / epidemiology
  • Rift Valley Fever / veterinary*
  • Rift Valley Fever / virology
  • Rift Valley fever virus / classification*
  • Rift Valley fever virus / genetics*
  • Rift Valley fever virus / isolation & purification
  • Ruminants
  • Saudi Arabia / epidemiology
  • South Africa / epidemiology
  • Viral Proteins / genetics
  • Viral Vaccines / genetics

Substances

  • DNA, Viral
  • Viral Proteins
  • Viral Vaccines