Functional and conformational changes in the aspartic protease cardosin A induced by TFE

Int J Biol Macromol. 2012 Mar 1;50(2):323-30. doi: 10.1016/j.ijbiomac.2011.12.018. Epub 2011 Dec 24.

Abstract

Conformational and functional changes of cardosin A, an aspartic protease of vegetal origin, in the presence of 2,2,2-trifluoroethanol (TFE), were assessed. TFE induced alterations of cardosin activity and conformation that differed with the solvent concentration. MD simulations showed that there are significant local alterations in protein flexibility and TFE molecules were found to replace several hydration molecules in the active site of the enzyme. This may explain some of the activity loss observed in the presence of TFE, especially at low TFE concentrations, as well as the recovery of enzyme activity upon aqueous dilution, indicating the release of the TFE molecules from the active site.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aspartic Acid Endopeptidases / chemistry*
  • Aspartic Acid Endopeptidases / metabolism*
  • Catalytic Domain / drug effects
  • Computer Simulation
  • Enzyme Activation / drug effects
  • Models, Molecular
  • Plant Proteins / chemistry*
  • Plant Proteins / metabolism*
  • Protein Conformation / drug effects
  • Spectrometry, Fluorescence
  • Trifluoroethanol / pharmacology*

Substances

  • Plant Proteins
  • Trifluoroethanol
  • Aspartic Acid Endopeptidases
  • aspartic proteinases, Cynara cardunculus