A closer look at the nitrogen next door: 1H-15N NMR methods for glycosaminoglycan structural characterization

J Magn Reson. 2012 Mar:216:169-74. doi: 10.1016/j.jmr.2012.01.018. Epub 2012 Feb 8.

Abstract

Recently, experimental conditions were presented for the detection of the N-sulfoglucosamine (GlcNS) NHSO(3)(-) or sulfamate (1)H and (15)N NMR resonances of the pharmaceutically and biologically important glycosaminoglycan (GAG) heparin in aqueous solution. In the present work, we explore further the applicability of nitrogen-bound proton detection to provide structural information for GAGs. Compared to the detection of (15)N chemical shifts of aminosugars through long-range couplings using the IMPACT-HNMBC pulse sequence, the more sensitive two-dimensional (1)H-(15)N HSQC-TOCSY experiments provided additional structural data. The IMPACT-HNMBC experiment remains a powerful tool as demonstrated by the spectrum measured for the unsubstituted amine of 3-O-sulfoglucosamine (GlcN(3S)), which cannot be observed with the (1)H-(15)N HSQC-TOCSY experiment due to the fast exchange of the amino group protons with solvent. The (1)H-(15)N HSQC-TOCSY NMR spectrum reported for the mixture of model compounds GlcNS and N-acetylglucosamine (GlcNAc) demonstrate the broad utility of this approach. Measurements for the synthetic pentasaccharide drug Arixtra® (Fondaparinux sodium) in aqueous solution illustrate the power of this NMR pulse sequence for structural characterization of highly similar N-sulfoglucosamine residues in GAG-derived oligosaccharides.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Sugars / chemistry
  • Carbohydrate Sequence
  • Fondaparinux
  • Glycosaminoglycans / chemistry*
  • Heparin / chemistry
  • Molecular Sequence Data
  • Nitrogen / chemistry
  • Nuclear Magnetic Resonance, Biomolecular / methods*
  • Oligosaccharides / analysis
  • Peptides / chemistry
  • Polysaccharides / chemistry
  • Protons
  • Solutions
  • Solvents

Substances

  • Amino Sugars
  • Glycosaminoglycans
  • Oligosaccharides
  • Peptides
  • Polysaccharides
  • Protons
  • Solutions
  • Solvents
  • Heparin
  • Fondaparinux
  • Nitrogen