[Quantitative detection and species identificaton of human Plasmodium spp. by using SYBR Green I based real-time PCR]

Zhongguo Xue Xi Chong Bing Fang Zhi Za Zhi. 2011 Dec;23(6):677-81.
[Article in Chinese]

Abstract

Objective: To develop a real-time PCR method for human Plasmodium spp. qantitative detection and species identificaton.

Methods: According to the sequence of Plasmodium 18S rRNA, the primer set was designed based on the genus-specific region around the species-specfic region. The PCR products were amplified and cloned into pGEM-T vector to produce standard plasmids of real-time PCR, and melting curve analysis was conducted following real-time PCR for Plasmodium species indentification.

Results: By using the primer set, specific PCR products were produced from all of 4 human malaria parasites. The correlation of real-time PCR standard curve was good enough (r = -1.00) for quantitation. According to the melting curve analysis, the melting temperatures (Tm) of Plasmodium malariae, falciparum, ovale and vivax were significantly different, being 71.3, 72.8, 74.6 degrees C and 75.8 degrees C, respectively.

Conclusion: The SYBR Green I based real-time PCR method developed in this study can be used for human Plasmodium spp. quantitative detection and species identificaton.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Benzothiazoles
  • DNA, Protozoan / genetics
  • Diamines
  • Humans
  • Molecular Sequence Data
  • Organic Chemicals / chemistry
  • Plasmodium / genetics
  • Plasmodium / isolation & purification*
  • Plasmodium malariae / parasitology*
  • Quinolines
  • Real-Time Polymerase Chain Reaction / instrumentation
  • Real-Time Polymerase Chain Reaction / methods*

Substances

  • Benzothiazoles
  • DNA, Protozoan
  • Diamines
  • Organic Chemicals
  • Quinolines
  • SYBR Green I