[Prediction and screening of CTGF secondary structure and receptor-binding domain]

Sichuan Da Xue Xue Bao Yi Xue Ban. 2012 Jan;43(1):83-5, 90.
[Article in Chinese]

Abstract

Objective: To analyze the secondary structure of connective tissue growth factor (CTGF) for the prediction and screening of candidate receptor-binding domain of CTGF.

Methods: Bioinformatics method was employed to predict and screen CTGF receptor-binding domain based on the analysis of secondary structure of CTGF, and its hydrophilicity and physical property.

Results: The results showed that the candidate receptor-binding domains locate in 96-102, 104-112, 257-272 segments, the corresponding amino acid sequences are TAKDGAP, IFGGTVYRS and IRTPKISKPIKFELSG, respectively.

Conclusion: There were 3 candidate receptor-binding domains of CTGF, which might be the targets for newly antagonistic micromolecule polypeptide of CTGF.

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Connective Tissue Growth Factor / chemistry*
  • Connective Tissue Growth Factor / metabolism*
  • Female
  • Humans
  • Male
  • Molecular Sequence Data
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary

Substances

  • CCN2 protein, human
  • Connective Tissue Growth Factor