Cloning and expression of pathogenesis-related protein 4 from jelly fig (Ficus awkeotsang Makino) achenes associated with ribonuclease, chitinase and anti-fungal activities

Plant Physiol Biochem. 2012 Jul:56:1-13. doi: 10.1016/j.plaphy.2012.04.004. Epub 2012 Apr 21.

Abstract

A cDNA fragment (FaPR4) encoding a class I pathogenesis-related protein 4 (PR-4) from Ficus awkeotsang was obtained by PCR cloning. Plant PR-4s were grouped into class I and II, differing by the presence of ChtBD and hinge. The predicted mature FaPR4 comprises N-terminal chitin-binding domain (ChtBD), hinge, Barwin domain and C-terminal extension. FaPR4-C, an N-terminal truncated form of FaPR4, was designed to mimic the structural feature of class II PR-4s. FaPR4 and FaPR4-C were over-expressed in yeast Pichia pastoris, and both recombinants exhibited RNase and anti-fungal activities. To our knowledge, it is the first report that FaPR4, a member of class I PR-4s has RNase activity as class II. FaPR4 possesses better anti-fungal activities toward Fusarium oxysporum and Sclerotium rolfsii than FaPR4-C. Heat-treated FaPR4 remained RNase and anti-fungal activities; while heat-treated FaPR4-C lost those activities. Therefore, ChtBD of FaPR4 may not only contribute to its anti-fungal but also improve the thermal stability of protein. It also implied the correlation of RNase activity with anti-fungal activity of FaPR4-C. Furthermore, FaPR4 was detected to have weak but significant chitinase activity, and its chitinase activity was reduced after heat treatment. The chitinase activity by FaPR4-C was much lower than FaPR4.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antifungal Agents / metabolism
  • Antifungal Agents / pharmacology*
  • Chitin / metabolism*
  • Chitinases / metabolism
  • Cloning, Molecular
  • DNA, Complementary
  • Ficus / chemistry*
  • Fungi / drug effects*
  • Fusarium / drug effects
  • Gene Expression*
  • Hot Temperature
  • Molecular Sequence Data
  • Pichia / metabolism
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Plant Proteins / pharmacology*
  • RNA / metabolism
  • Ribonucleases / genetics
  • Ribonucleases / metabolism
  • Ribonucleases / pharmacology*
  • Seeds / chemistry

Substances

  • Antifungal Agents
  • DNA, Complementary
  • Plant Proteins
  • pathogenesis-related proteins, plant
  • Chitin
  • RNA
  • Ribonucleases
  • Chitinases

Associated data

  • GENBANK/ADO24163