Atlas-based fiber reconstruction from diffusion tensor MRI data

Int J Comput Assist Radiol Surg. 2012 Nov;7(6):959-67. doi: 10.1007/s11548-012-0774-6. Epub 2012 Jun 24.

Abstract

Purpose: Develop a neural fiber reconstruction method based on diffusion tensor imaging, which is not as sensitive to user-defined regions of interest as streamline tractography.

Methods: A simulated annealing approach is employed to find a non-rigid transformation to map a fiber bundle from a fiber atlas to another fiber bundle, which minimizes a specific energy functional. The energy functional describes how well the transformed fiber bundle fits the patient's diffusion tensor data.

Results: The feasibility of the method is demonstrated on a diffusion tensor software phantom. We analyze the behavior of the algorithm with respect to image noise and number of iterations. First results on the datasets of patients are presented.

Conclusions: The described method maps fiber bundles based on diffusion tensor data and shows high robustness to image noise. Future developments of the method should help simplify inter-subject comparisons of fiber bundles.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Atlases as Topic
  • Brain Mapping / methods*
  • Diffusion Magnetic Resonance Imaging / methods*
  • Feasibility Studies
  • Humans
  • Image Processing, Computer-Assisted / methods*
  • Neural Pathways / anatomy & histology*
  • Phantoms, Imaging
  • Software