Analysis of hepcidin expression: in situ hybridization and quantitative polymerase chain reaction from paraffin sections

World J Gastroenterol. 2012 Jul 28;18(28):3727-31. doi: 10.3748/wjg.v18.i28.3727.

Abstract

Aim: To establish methods for quantitative polymerase chain reaction (PCR) for hepcidin using RNAs isolated from paraffin-embedded sections and in situ hybridization of hepatocellular carcinoma (HCC).

Methods: Total RNA from paraffin-embedded sections was isolated from 68 paraffin-embedded samples of HCC. Samples came from 54 male and 14 female patients with a mean age of 66.8 ± 7.8 years. Quantitative PCR was performed. Immunohistochemistry and in situ hybridization for hepcidin were also performed.

Results: Quantitative PCR for hepcidin using RNAs isolated from paraffin-embedded sections of HCC was performed successfully. The expression level of hepcidin mRNA in cancer tissues was significantly higher than that in non-cancer tissues. A method of in situ hybridization for hepcidin was established successfully, and this demonstrated that hepcidin mRNA was expressed in non-cancerous tissue but absent in cancerous tissue.

Conclusion: We have established novel methods for quantitative PCR for hepcidin using RNAs isolated from paraffin-embedded sections and in situ hybridization of HCC.

Keywords: Expression; Hepcidin; Immunohistochemistry; In situ hybridization; Real-time polymerase chain reaction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Antimicrobial Cationic Peptides / biosynthesis*
  • Carcinoma, Hepatocellular / metabolism*
  • Female
  • Gene Expression Regulation, Neoplastic*
  • Hepcidins
  • Humans
  • Immunohistochemistry / methods
  • In Situ Hybridization
  • Liver Neoplasms / metabolism*
  • Male
  • Middle Aged
  • Paraffin / chemistry
  • Paraffin Embedding / methods
  • Real-Time Polymerase Chain Reaction / methods

Substances

  • Antimicrobial Cationic Peptides
  • HAMP protein, human
  • Hepcidins
  • Paraffin