Genome sequence of the pathogenic Herbaspirillum seropedicae strain Os45, isolated from rice roots

Bo Zhu; Shuting Ye; Siping Chang; Mingyue Chen; Li Sun; Qianli An

doi:10.1128/JB.01935-12

Genome sequence of the pathogenic Herbaspirillum seropedicae strain Os45, isolated from rice roots

J Bacteriol. 2012 Dec;194(24):6995-6. doi: 10.1128/JB.01935-12.

Authors

Bo Zhu¹, Shuting Ye, Siping Chang, Mingyue Chen, Li Sun, Qianli An

Affiliation

¹ State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, China.

Abstract

Most Herbaspirillum seropedicae strains are beneficial to plants. In contrast, H. seropedicae strain Os45, isolated from rice roots, is pathogenic. The draft genome sequence of strain Os45 presented here allows an in-depth comparative genome analysis to understand the subtle mechanisms of beneficial and pathogenic Herbaspirillum-plant interactions.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Base Sequence
DNA, Bacterial / genetics
Fimbriae, Bacterial / genetics
Genome, Bacterial*
Herbaspirillum / genetics*
Herbaspirillum / isolation & purification
Host-Pathogen Interactions
Molecular Sequence Data
Oryza / microbiology*
Plant Roots / microbiology*
RNA, Bacterial / genetics
Sequence Analysis, DNA

Substances

DNA, Bacterial
RNA, Bacterial

Associated data

GENBANK/AMSA00000000
GENBANK/AMSA01000000