Draft genome sequence of the rubber tree Hevea brasiliensis

BMC Genomics. 2013 Feb 2:14:75. doi: 10.1186/1471-2164-14-75.

Abstract

Background: Hevea brasiliensis, a member of the Euphorbiaceae family, is the major commercial source of natural rubber (NR). NR is a latex polymer with high elasticity, flexibility, and resilience that has played a critical role in the world economy since 1876.

Results: Here, we report the draft genome sequence of H. brasiliensis. The assembly spans ~1.1 Gb of the estimated 2.15 Gb haploid genome. Overall, ~78% of the genome was identified as repetitive DNA. Gene prediction shows 68,955 gene models, of which 12.7% are unique to Hevea. Most of the key genes associated with rubber biosynthesis, rubberwood formation, disease resistance, and allergenicity have been identified.

Conclusions: The knowledge gained from this genome sequence will aid in the future development of high-yielding clones to keep up with the ever increasing need for natural rubber.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allergens / genetics
  • Disease Resistance / genetics
  • Evolution, Molecular
  • F-Box Proteins / genetics
  • Genome, Plant / genetics
  • Genomics*
  • Haploidy
  • Hevea / genetics*
  • Hevea / immunology
  • Hevea / metabolism
  • Latex / metabolism
  • Molecular Sequence Annotation
  • Phylogeny
  • Plant Growth Regulators / genetics
  • Rubber / metabolism
  • Sequence Analysis*
  • Signal Transduction / genetics
  • Transcription Factors / genetics
  • Wood / metabolism

Substances

  • Allergens
  • F-Box Proteins
  • Latex
  • Plant Growth Regulators
  • Transcription Factors
  • Rubber