'See-saw' expression of microRNA-198 and FSTL1 from a single transcript in wound healing

Nature. 2013 Mar 7;495(7439):103-6. doi: 10.1038/nature11890. Epub 2013 Feb 10.

Abstract

Post-transcriptional switches are flexible effectors of dynamic changes in gene expression. Here we report a new post-transcriptional switch that dictates the spatiotemporal and mutually exclusive expression of two alternative gene products from a single transcript. Expression of primate-specific exonic microRNA-198 (miR-198), located in the 3'-untranslated region of follistatin-like 1 (FSTL1) messenger RNA, switches to expression of the linked open reading frame of FSTL1 upon wounding in a human ex vivo organ culture system. We show that binding of a KH-type splicing regulatory protein (KSRP, also known as KHSRP) to the primary transcript determines the fate of the transcript and is essential for the processing of miR-198: transforming growth factor-β signalling switches off miR-198 expression by downregulating KSRP, and promotes FSTL1 protein expression. We also show that FSTL1 expression promotes keratinocyte migration, whereas miR-198 expression has the opposite effect by targeting and inhibiting DIAPH1, PLAU and LAMC2. A clear inverse correlation between the expression pattern of FSTL1 (pro-migratory) and miR-198 (anti-migratory) highlights the importance of this regulatory switch in controlling context-specific gene expression to orchestrate wound re-epithelialization. The deleterious effect of failure of this switch is apparent in non-healing chronic diabetic ulcers, in which expression of miR-198 persists, FSTL1 is absent, and keratinocyte migration, re-epithelialization and wound healing all fail to occur.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing / antagonists & inhibitors
  • Adaptor Proteins, Signal Transducing / metabolism
  • Cell Movement
  • Diabetic Foot / genetics
  • Diabetic Foot / metabolism
  • Diabetic Foot / pathology
  • Exons / genetics
  • Follistatin-Related Proteins / biosynthesis
  • Follistatin-Related Proteins / genetics*
  • Formins
  • Gene Expression Regulation / genetics*
  • Humans
  • In Vitro Techniques
  • Keratinocytes / cytology
  • Keratinocytes / metabolism
  • Laminin / antagonists & inhibitors
  • Laminin / metabolism
  • MicroRNAs / genetics*
  • Open Reading Frames / genetics
  • RNA, Messenger / genetics*
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism
  • Skin / cytology
  • Skin / injuries
  • Skin / metabolism
  • Skin / pathology
  • Time Factors
  • Trans-Activators / genetics
  • Trans-Activators / metabolism
  • Transcription, Genetic / genetics*
  • Transforming Growth Factor beta1 / metabolism
  • Urokinase-Type Plasminogen Activator / antagonists & inhibitors
  • Urokinase-Type Plasminogen Activator / metabolism
  • Wound Healing / genetics*

Substances

  • Adaptor Proteins, Signal Transducing
  • DIAPH1 protein, human
  • Follistatin-Related Proteins
  • Formins
  • KHSRP protein, human
  • LAMC2 protein, human
  • Laminin
  • MIRN198 microRNA, human
  • MicroRNAs
  • RNA, Messenger
  • RNA-Binding Proteins
  • Trans-Activators
  • Transforming Growth Factor beta1
  • FSTL1 protein, human
  • Urokinase-Type Plasminogen Activator

Associated data

  • GEO/GSE37967
  • GEO/GSE41615