Discovery of novel tricyclic indole derived inhibitors of HCV NS5B RNA dependent RNA polymerase

Bioorg Med Chem. 2013 Apr 1;21(7):2007-17. doi: 10.1016/j.bmc.2013.01.024. Epub 2013 Jan 23.

Abstract

The characterization of HCV genome has identified various vital functional proteins involved in the life cycle of hepatitis C virus. This has resulted in many novel enzymatic targets that are potential for development of therapeutic agents. The HCV RNA dependent RNA polymerase (HCV NS5B) is one such essential enzyme for HCV replication that has been well characterized and studied by various groups to develop novel therapies for hepatitis C. In this paper, we describe our efforts towards the identification and structure-activity relationship (SAR) of novel tricyclic indole derivatives that bind close to the palm site of the NS5B polymerase. X-ray crystal structure of an inhibitor bound to the polymerase is also described.

MeSH terms

  • Antiviral Agents / chemistry*
  • Antiviral Agents / pharmacology*
  • Binding Sites
  • Crystallography, X-Ray
  • Hepacivirus / chemistry
  • Hepacivirus / enzymology*
  • Hepatitis C / drug therapy
  • Hepatitis C / virology
  • Humans
  • Indoles / chemistry*
  • Indoles / pharmacology*
  • Molecular Docking Simulation
  • RNA-Dependent RNA Polymerase / antagonists & inhibitors*
  • RNA-Dependent RNA Polymerase / chemistry
  • RNA-Dependent RNA Polymerase / metabolism
  • Structure-Activity Relationship

Substances

  • Antiviral Agents
  • Indoles
  • RNA-Dependent RNA Polymerase