Super-resolution in solution X-ray scattering and its applications to structural systems biology

Annu Rev Biophys. 2013:42:415-41. doi: 10.1146/annurev-biophys-083012-130301. Epub 2013 Mar 11.

Abstract

Small-angle X-ray scattering (SAXS) is a robust technique for the comprehensive structural characterizations of biological macromolecular complexes in solution. Here, we present a coherent synthesis of SAXS theory and experiment with a focus on analytical tools for accurate, objective, and high-throughput investigations. Perceived SAXS limitations are considered in light of its origins, and we present current methods that extend SAXS data analysis to the super-resolution regime. In particular, we discuss hybrid structural methods, illustrating the role of SAXS in structure refinement with NMR and ensemble refinement with single-molecule FRET. High-throughput genomics and proteomics are far outpacing macromolecular structure determinations, creating information gaps between the plethora of newly identified genes, known structures, and the structure-function relationship in the underlying biological networks. SAXS can bridge these information gaps by providing a reliable, high-throughput structural characterization of macromolecular complexes under physiological conditions.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Animals
  • DNA / chemistry
  • Fluorescence Resonance Energy Transfer
  • Humans
  • Macromolecular Substances
  • Nuclear Magnetic Resonance, Biomolecular
  • Proteins / chemistry*
  • Scattering, Small Angle*
  • Systems Biology / methods*
  • X-Ray Diffraction*

Substances

  • Macromolecular Substances
  • Proteins
  • DNA