4-Hydroxy-3-methyl-6-(1-methyl-2-oxoalkyl)pyran-2-one synthesis by a type III polyketide synthase from Rhodospirillum centenum

Chembiochem. 2013 May 27;14(8):1006-13. doi: 10.1002/cbic.201300066. Epub 2013 Apr 22.

Abstract

The purple photosynthetic bacterium Rhodospirillum centenum has a putative type III polyketide synthase gene (rpsA). Although rpsA was known to be transcribed during the formation of dormant cells, the reaction catalyzed by RpsA was unknown. Thus we examined the RpsA reaction in vitro, using various fatty acyl-CoAs with even numbers of carbons as starter substrates. RpsA produced tetraketide pyranones as major compounds from one C(10-14) fatty acyl-CoA unit, one malonyl-CoA unit and two methylmalonyl-CoA units. We identified these products as 4-hydroxy-3-methyl-6-(1-methyl-2-oxoalkyl)pyran-2-ones by NMR analysis. RpsA is the first bacterial type III PKS that prefers to incorporate two molecules of methylmalonyl-CoA as the extender substrate. In addition, in vitro reactions with (13)C-labeled malonyl-CoA revealed that RpsA produced tetraketide 6-alkyl-4-hydroxy-1,5-dimethyl-2-oxocyclohexa-3,5-diene-1-carboxylic acids from C(14-20) fatty acyl-CoAs. This class of compounds is likely synthesized through aldol condensation induced by methine proton abstraction. No type III polyketide synthase that catalyzes this reaction has been reported so far. These two unusual features of RpsA extend the catalytic functions of the type III polyketide synthase family.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyl Coenzyme A / metabolism*
  • Acyltransferases / genetics
  • Acyltransferases / metabolism*
  • Genetic Loci
  • Malonyl Coenzyme A / metabolism
  • Pyrans / chemistry*
  • Pyrans / metabolism*
  • Rhodospirillum centenum / chemistry
  • Rhodospirillum centenum / enzymology*
  • Rhodospirillum centenum / genetics
  • Rhodospirillum centenum / metabolism
  • Substrate Specificity

Substances

  • Acyl Coenzyme A
  • Pyrans
  • methylmalonyl-coenzyme A
  • Malonyl Coenzyme A
  • Acyltransferases
  • flavanone synthetase