Lactobacillus heilongjiangensis sp. nov., isolated from Chinese pickle

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4094-4099. doi: 10.1099/ijs.0.053355-0. Epub 2013 May 31.

Abstract

A Gram-stain-positive bacterial strain, S4-3(T), was isolated from traditional pickle in Heilongjiang Province, China. The bacterium was characterized by a polyphasic approach, including 16S rRNA gene sequence analysis, pheS gene sequence analysis, rpoA gene sequence analysis, dnaK gene sequence analysis, fatty acid methyl ester (FAME) analysis, determination of DNA G+C content, DNA-DNA hybridization and an analysis of phenotypic features. Strain S4-3(T) showed 97.9-98.7 % 16S rRNA gene sequence similarities, 84.4-94.1 % pheS gene sequence similarities and 94.4-96.9 % rpoA gene sequence similarities to the type strains of Lactobacillus nantensis, Lactobacillus mindensis, Lactobacillus crustorum, Lactobacillus futsaii, Lactobacillus farciminis and Lactobacillus kimchiensis. dnaK gene sequence similarities between S4-3(T) and Lactobacillus nantensis LMG 23510(T), Lactobacillus mindensis LMG 21932(T), Lactobacillus crustorum LMG 23699(T), Lactobacillus futsaii JCM 17355(T) and Lactobacillus farciminis LMG 9200(T) were 95.4, 91.5, 90.4, 91.7 and 93.1 %, respectively. Based upon the data obtained in the present study, a novel species, Lactobacillus heilongjiangensis sp. nov., is proposed and the type strain is S4-3(T) ( = LMG 26166(T) = NCIMB 14701(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Fermentation
  • Food Microbiology*
  • Genes, Bacterial
  • Lactobacillus / classification*
  • Lactobacillus / genetics
  • Lactobacillus / isolation & purification
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Vegetables / microbiology

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/HF679040
  • GENBANK/HF679041
  • GENBANK/HF679049
  • GENBANK/JF411966
  • GENBANK/JF411971
  • GENBANK/JF411980
  • GENBANK/JF411981
  • GENBANK/JF411982
  • GENBANK/JF411983
  • GENBANK/JF411984
  • GENBANK/JF411985
  • GENBANK/JF411986
  • GENBANK/JF411987
  • GENBANK/JF411988