Structure of an early native-like intermediate of β2-microglobulin amyloidogenesis

Protein Sci. 2013 Oct;22(10):1349-57. doi: 10.1002/pro.2321. Epub 2013 Aug 20.

Abstract

To investigate early intermediates of β2-microglobulin (β2m) amyloidogenesis, we solved the structure of β2m containing the amyloidogenic Pro32Gly mutation by X-ray crystallography. One nanobody (Nb24) that efficiently blocks fibril elongation was used as a chaperone to co-crystallize the Pro32Gly β2m monomer under physiological conditions. The complex of P32G β2m with Nb24 reveals a trans peptide bond at position 32 of this amyloidogenic variant, whereas Pro32 adopts the cis conformation in the wild-type monomer, indicating that the cis to trans isomerization at Pro32 plays a critical role in the early onset of β2m amyloid formation.

Keywords: X-ray crystallography; dialysis-related amyloidosis; nanobodies; proline isomerization; protein conformation; β2-microglobulin.

MeSH terms

  • Amino Acid Motifs
  • Circular Dichroism
  • Crystallography, X-Ray / methods
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Glycine / chemistry
  • Glycine / genetics
  • Humans
  • Models, Molecular
  • Mutation, Missense
  • Proline / chemistry
  • Proline / genetics
  • Protein Folding
  • Protein Structure, Tertiary*
  • Single-Domain Antibodies / chemistry
  • beta 2-Microglobulin / chemistry*
  • beta 2-Microglobulin / genetics*

Substances

  • Single-Domain Antibodies
  • beta 2-Microglobulin
  • Proline
  • Glycine

Associated data

  • PDB/4KDT