[A missense SNP in the codon of ADD1 phosphorylation site associated with non-cardia gastric cancer susceptibility in a Chinese population]

Zhonghua Zhong Liu Za Zhi. 2013 Apr;35(4):311-4. doi: 10.3760/cma.j.issn.0253-3766.2013.04.016.
[Article in Chinese]

Abstract

Objective: This study investigated the association between a missense SNP in the codon of ADD1 phosphorylation site and the susceptibility of non-cardia gastric cancer in a Chinese population.

Methods: PhosphoSitePlus and dbSNP database were combined to discover missense SNPs in the codon of phosphorylation site. Then, we genotyped the missense SNP in 1, 998 cases with non-cardia gastric cancer and 2, 008 cancer-free controls of Chinese descent. Analysis was conducted by using Logistic model adjusted by gender and age.

Results: The rs4963 in the codon of ADD1 phosphorylation site was found. The frequencies of the 3 rs4963 genotypes, CC, CG, GG, among controls were 25.2%, 50.4%, and 24.4%, respectively, among patients were 20.1%, 50.6%, and 29.3%, respectively. Compared with CC genotype, the rs4963 CG genotype and GG genotype significantly increased the risk of non-cardia gastric cancer with the odds ratios being 1.24 (95%CI: 1.06 ∼ 1.46, P = 0.008) and 1.49 (95%CI: 1.25 ∼ 1.78, P < 0.001), respectively.

Conclusions: Fnnctional polymorphism in the phosphorylation site of ADD1 (rs4963) may influence the susceptibility of non-cardia gastric cancer.

MeSH terms

  • Aged
  • Asian People / genetics
  • Calmodulin-Binding Proteins / genetics*
  • Codon
  • Female
  • Genetic Predisposition to Disease*
  • Genotype
  • Humans
  • Logistic Models
  • Male
  • Middle Aged
  • Mutation, Missense*
  • Odds Ratio
  • Phosphorylation
  • Polymorphism, Single Nucleotide*
  • Stomach Neoplasms / ethnology
  • Stomach Neoplasms / genetics*

Substances

  • Calmodulin-Binding Proteins
  • Codon
  • adducin