GeneProf data: a resource of curated, integrated and reusable high-throughput genomics experiments

Nucleic Acids Res. 2014 Jan;42(Database issue):D851-8. doi: 10.1093/nar/gkt966. Epub 2013 Oct 29.

Abstract

GeneProf Data (http://www.geneprof.org) is an open web resource for analysed functional genomics experiments. We have built up a large collection of completely processed RNA-seq and ChIP-seq studies by carefully and transparently reanalysing and annotating high-profile public data sets. GeneProf makes these data instantly accessible in an easily interpretable, searchable and reusable manner and thus opens up the path to the advantages and insights gained from genome-scale experiments to a broader scientific audience. Moreover, GeneProf supports programmatic access to these data via web services to further facilitate the reuse of experimental data across tools and laboratories.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • Databases, Genetic*
  • Gene Expression Profiling
  • Genomics*
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Internet
  • Mice
  • Sequence Analysis, RNA
  • Systems Integration
  • Transcription Factors / metabolism

Substances

  • Transcription Factors