The structural motifs for substrate binding and dimerization of the α subunit of collagen prolyl 4-hydroxylase

Structure. 2013 Dec 3;21(12):2107-18. doi: 10.1016/j.str.2013.09.005. Epub 2013 Oct 24.

Abstract

Collagen prolyl 4-hydroxylase (C-P4H) catalyzes the proline hydroxylation of procollagen, an essential modification in the maturation of collagens. C-P4H consists of two catalytic α subunits and two protein disulfide isomerase β subunits. The assembly of these subunits is unknown. The α subunit contains an N domain (1-143), a peptide-substrate-binding-domain (PSB, 144-244) and a catalytic domain (245-517). Here, we report the dimeric structure of the N-terminal region (1-244) of the α subunit. It is shown that the N domain has an important role in the assembly of the C-P4H tetramer, by forming an extended four-helix bundle that includes an antiparallel coiled-coil dimerization motif between the two α subunits. Complexes of this construct with a C-P4H inhibitor and substrate show the mode of peptide-binding to the PSB domain. Both peptides adopt a poly-(L)-proline-type-II helix conformation and bind in a curved, asymmetric groove lined by conserved tyrosines and an Arg-Asp salt bridge.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Crystallography, X-Ray
  • Humans
  • Models, Molecular
  • Molecular Sequence Data
  • Peptides / chemistry
  • Procollagen-Proline Dioxygenase / chemistry*
  • Protein Binding
  • Protein Conformation
  • Protein Multimerization
  • Protein Subunits / chemistry
  • Substrate Specificity

Substances

  • Peptides
  • Protein Subunits
  • Procollagen-Proline Dioxygenase