RNA binding fragments from nucleolin contain the ribonucleoprotein consensus sequence

J Biol Chem. 1987 Aug 15;262(23):10922-5.

Abstract

Nucleolin (C23 or 100 kDa) is a major nucleolar phosphoprotein whose primary structure has recently been determined (Lapeyre, B., Bourbon, H., and Amalric, F. (1987) Proc. Natl. Acad. Sci. U. S. A. 84, 1472-1476) and found to be associated with preribosomal RNA (Herrera, A. H., and Olson, M. O. J. (1986) Biochemistry 25, 6258-6263). To identify the RNA binding region of the molecule, cyanogen bromide fragments were tested for binding of 18 S and 28 S ribosomal RNA by a "Western blotting" technique. Fragments with apparent molecular masses of 13, 33, and 47 kDa bound RNA with no preference for either 18 S or 28 S RNA. By protein sequencing, these fragments were localized in the carboxyl-terminal two-thirds of the molecule. The nucleolin sequence was searched for the ribonucleoprotein consensus sequence found in other RNA binding proteins. Four copies of a closely related 11-residue sequence were found within 80-90 residue repeats in the RNA binding region between residues 285 and 629. These results suggest that a highly conserved structure for the binding of different classes of RNA is utilized by several proteins.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cell Line
  • Cricetinae
  • Cyanogen Bromide
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Nucleolin
  • Nucleoproteins / metabolism*
  • Peptide Fragments / metabolism*
  • Phosphoproteins / metabolism*
  • Poly A / metabolism
  • RNA / metabolism*
  • RNA-Binding Proteins*
  • Ribonucleoproteins*

Substances

  • Heterogeneous-Nuclear Ribonucleoproteins
  • Nucleoproteins
  • Peptide Fragments
  • Phosphoproteins
  • RNA-Binding Proteins
  • Ribonucleoproteins
  • Poly A
  • RNA
  • Cyanogen Bromide