Expedient total synthesis of small to medium-sized membrane proteins via Fmoc chemistry

J Am Chem Soc. 2014 Mar 5;136(9):3695-704. doi: 10.1021/ja500222u. Epub 2014 Feb 21.

Abstract

Total chemical synthesis provides a unique approach for the access to uncontaminated, monodisperse, and more importantly, post-translationally modified membrane proteins. In the present study we report a practical procedure for expedient and cost-effective synthesis of small to medium-sized membrane proteins in multimilligram scale through the use of automated Fmoc chemistry. The key finding of our study is that after the attachment of a removable arginine-tagged backbone modification group, the membrane protein segments behave almost the same as ordinary water-soluble peptides in terms of Fmoc solid-phase synthesis, ligation, purification, and mass spectrometry characterization. The efficiency and practicality of the new method is demonstrated by the successful preparation of Ser64-phosphorylated M2 proton channel from influenza A virus and the membrane-embedded domain of an inward rectifier K(+) channel protein Kir5.1. Functional characterizations of these chemically synthesized membrane proteins indicate that they provide useful and otherwise-difficult-to-access materials for biochemistry and biophysics studies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Fluorenes / chemistry*
  • Kinetics
  • Kir5.1 Channel
  • Membrane Proteins / chemical synthesis*
  • Membrane Proteins / chemistry
  • Molecular Sequence Data
  • Phosphorylation
  • Potassium Channels, Inwardly Rectifying / chemical synthesis
  • Potassium Channels, Inwardly Rectifying / chemistry
  • Protein Structure, Tertiary
  • Solid-Phase Synthesis Techniques / methods*
  • Trifluoroacetic Acid / chemistry
  • Viral Matrix Proteins / chemical synthesis
  • Viral Matrix Proteins / chemistry

Substances

  • 9-fluorenylmethoxycarbonyl
  • Fluorenes
  • M2 protein, Influenza A virus
  • Membrane Proteins
  • Potassium Channels, Inwardly Rectifying
  • Viral Matrix Proteins
  • Trifluoroacetic Acid