On the role of the Shine-Dalgarno sequence in determining the efficiency of translation initiation at a weak start codon in the car operon of Escherichia coli K12

J Mol Biol. 1988 Dec 20;204(4):1045-8. doi: 10.1016/0022-2836(88)90061-7.

Abstract

Translation of the carA gene is efficiently initiated at the intrinsically weak UUG codon. A single nucleotide substitution changing the Shine-Dalgarno box of carA (GGAGG) into the sequence TGAGG reduces translation of carA sevenfold. This result supports the view that extensive complementarity between the Shine-Dalgarno sequence and 16S RNA contributes significantly to the efficiency of translation when the latter starts at a weak initiation triplet.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Codon*
  • Escherichia coli / genetics*
  • Genes, Bacterial
  • Lac Operon*
  • Molecular Sequence Data
  • Protein Biosynthesis*
  • RNA, Bacterial / genetics
  • RNA, Messenger*
  • RNA, Ribosomal, 16S / genetics

Substances

  • Codon
  • RNA, Bacterial
  • RNA, Messenger
  • RNA, Ribosomal, 16S