Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus

FEBS J. 2014 Sep;281(18):4224-39. doi: 10.1111/febs.12784. Epub 2014 Apr 7.

Abstract

Methionine adenosyltransferase (MAT) is a family of enzymes that utilizes ATP and methionine to produce S-adenosylmethionine (AdoMet), the most crucial methyl donor in the biological methylation of biomolecules and bioactive natural products. Here, we report that the MAT from Sulfolobus solfataricus (sMAT), an enzyme from a poorly explored class of the MAT family, has the ability to produce a range of differentially alkylated AdoMet analogs in the presence of non-native methionine analogs and ATP. To investigate the molecular basis for AdoMet analog production, we have crystallized the sMAT in the AdoMet bound, S-adenosylethionine (AdoEth) bound and unbound forms. Notably, among these structures, the AdoEth bound form offers the first MAT structure containing a non-native product, and cumulatively these structures add new structural insight into the MAT family and allow for detailed active site comparison with its homologs in Escherichia coli and human. As a thermostable MAT structure from archaea, the structures herein also provide a basis for future engineering to potentially broaden AdoMet analog production as reagents for methyltransferase-catalyzed 'alkylrandomization' and/or the study of methylation in the context of biological processes.

Databases: PDB IDs: 4HPV, 4L7I, 4K0B and 4L2Z. EC 2.5.1.6 STRUCTURED DIGITAL ABSTRACT: • sMAT and sMAT bind by x-ray crystallography (View interaction).

Keywords: S-adenosylmethionine; X-ray diffraction; enzyme engineering; methionine adenosyltransferase; natural product.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Motifs
  • Archaeal Proteins / chemistry*
  • Catalytic Domain
  • Crystallography, X-Ray
  • Kinetics
  • Methionine / chemistry
  • Methionine Adenosyltransferase / chemistry*
  • Models, Molecular
  • Protein Binding
  • Protein Structure, Quaternary
  • Substrate Specificity
  • Sulfolobus solfataricus / enzymology*

Substances

  • Archaeal Proteins
  • Methionine
  • Methionine Adenosyltransferase

Associated data

  • PDB/4HPV
  • PDB/4K0B
  • PDB/4L2Z
  • PDB/4L7I