Structural insights into RNA encapsidation and helical assembly of the Toscana virus nucleoprotein

Nucleic Acids Res. 2014 May;42(9):6025-37. doi: 10.1093/nar/gku229. Epub 2014 Mar 31.

Abstract

Toscana virus is an emerging bunyavirus in Mediterranean Europe where it accounts for 80% of pediatric meningitis cases during the summer. The negative-strand ribonucleic acid (RNA) genome of the virus is wrapped around the virally encoded nucleoprotein N to form the ribonucleoprotein complex (RNP). We determined crystal structures of hexameric N alone (apo) and in complex with a nonameric single-stranded RNA. RNA is sequestered in a sequence-independent fashion in a deep groove inside the hexamer. At the junction between two adjacent copies of Ns, RNA binding induced an inter-subunit rotation, which opened the RNA-binding tunnel and created a new assembly interface at the outside of the hexamer. Based on these findings, we suggest a structural model for how binding of RNA to N promotes the formation of helical RNPs, which are a characteristic hallmark of many negative-strand RNA viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Crystallography, X-Ray
  • Models, Molecular
  • Nucleocapsid Proteins / chemistry*
  • Protein Binding
  • Protein Multimerization
  • Protein Structure, Quaternary
  • Protein Structure, Secondary
  • RNA, Viral / chemistry*
  • Sandfly fever Naples virus / physiology*
  • Virus Assembly

Substances

  • Nucleocapsid Proteins
  • RNA, Viral

Associated data

  • PDB/4CSF
  • PDB/4CSG