Computational tools for rational protein engineering of aldolases

Comput Struct Biotechnol J. 2012 Nov 13:2:e201209016. doi: 10.5936/csbj.201209016. eCollection 2012.

Abstract

In this mini-review we describe the different strategies for rational protein engineering and summarize the computational tools available. Computational tools can either be used to design focused libraries, to predict sequence-function relationships or for structure-based molecular modelling. This also includes de novo design of enzymes. Examples for protein engineering of aldolases and transaldolases are given in the second part of the mini-review.

Keywords: biocatalysis; de novo design; protein engineering; stereoselectivity; substrate specificity; transaldolase.

Publication types

  • Review