A chloroplast retrograde signal regulates nuclear alternative splicing

Science. 2014 Apr 25;344(6182):427-30. doi: 10.1126/science.1250322. Epub 2014 Apr 10.

Abstract

Light is a source of energy and also a regulator of plant physiological adaptations. We show here that light/dark conditions affect alternative splicing of a subset of Arabidopsis genes preferentially encoding proteins involved in RNA processing. The effect requires functional chloroplasts and is also observed in roots when the communication with the photosynthetic tissues is not interrupted, suggesting that a signaling molecule travels through the plant. Using photosynthetic electron transfer inhibitors with different mechanisms of action, we deduce that the reduced pool of plastoquinones initiates a chloroplast retrograde signaling that regulates nuclear alternative splicing and is necessary for proper plant responses to varying light conditions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Arabidopsis / genetics*
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Cell Nucleus / genetics
  • Chloroplasts / metabolism*
  • Circadian Clocks
  • Dibromothymoquinone / pharmacology
  • Diuron / pharmacology
  • Electron Transport / drug effects
  • Gene Expression Regulation, Plant*
  • Light
  • Models, Biological
  • Oxidation-Reduction
  • Photosynthesis / drug effects
  • Plant Leaves / metabolism
  • Plant Roots / metabolism
  • Plants, Genetically Modified
  • Plastoquinone / metabolism*
  • RNA Stability
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Plant / genetics
  • RNA, Plant / metabolism
  • Seedlings / genetics
  • Seedlings / metabolism
  • Signal Transduction

Substances

  • Arabidopsis Proteins
  • RNA, Messenger
  • RNA, Plant
  • Dibromothymoquinone
  • Diuron
  • Plastoquinone