Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer

Biochemistry. 2014 Jul 22;53(28):4696-703. doi: 10.1021/bi500497s. Epub 2014 Jul 9.

Abstract

Many proteins, including cytochrome c (cyt c), have been shown to form domain-swapped oligomers, but the factors governing the oligomerization process remain unrevealed. We obtained oligomers of cyt c by refolding cyt c from its acid molten globule state to neutral pH state under high protein and ion concentrations. The amount of oligomeric cyt c obtained depended on the nature of the anion (chaotropic or kosmotropic) in the solution: ClO4(-) (oligomers, 11% ± 2% (heme unit)), SCN(-) (10% ± 2%), I(-) (6% ± 2%), NO3(-) (3% ± 1%), Br(-) (2% ± 1%), Cl(-) (2% ± 1%), and SO4(2-) (3% ± 1%) for refolding of 2 mM cyt c (anion concentration 125 mM). Dimeric cyt c obtained by refolding from the molten globule state exhibited a domain-swapped structure, in which the C-terminal α-helices were exchanged between protomers. According to small-angle X-ray scattering measurements, approximately 25% of the cyt c molecules were dimerized in the molten globule state containing 125 mM ClO4(-). These results indicate that a certain amount of molten globule state oligomers of cyt c convert to domain-swapped oligomers during refolding and that the intermolecular interactions necessary for domain swapping are present in the molten globule state.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cytochromes c / chemistry*
  • Cytochromes c / genetics
  • Cytochromes c / metabolism
  • Models, Molecular*
  • Protein Folding*
  • Protein Multimerization*
  • Protein Structure, Secondary
  • Protein Structure, Tertiary

Substances

  • Cytochromes c