Nef-mediated down-regulation of CD4 and HLA class I in HIV-1 subtype C infection: association with disease progression and influence of immune pressure

Virology. 2014 Nov:468-470:214-225. doi: 10.1016/j.virol.2014.08.009. Epub 2014 Sep 3.

Abstract

Nef plays a major role in HIV-1 pathogenicity. We studied HIV-1 subtype C infected individuals in acute/early (n = 120) or chronic (n = 207) infection to investigate the relationship between Nef-mediated CD4/HLA-I down-regulation activities and disease progression, and the influence of immune-driven sequence variation on these Nef functions. A single Nef sequence per individual was cloned into an expression plasmid, followed by transfection of a T cell line and measurement of CD4 and HLA-I expression. In early infection, a trend of higher CD4 down-regulation ability correlating with higher viral load set point was observed (r = 0.19, p = 0.05), and higher HLA-I down-regulation activity was significantly associated with faster rate of CD4 decline (p = 0.02). HLA-I down-regulation function correlated inversely with the number HLA-associated polymorphisms previously associated with reversion in the absence of the selecting HLA allele (r = -0.21, p = 0.0002). These data support consideration of certain Nef regions in HIV-1 vaccine strategies designed to attenuate the infection course.

Keywords: CD4 down-regulation; HIV-1 Nef; HIV-1 disease progression; HIV-1 subtype C; HLA-I down-regulation; HLA-associated polymorphisms; Immune evasion.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • CD4-Positive T-Lymphocytes
  • Gene Expression Regulation / immunology*
  • Genes, MHC Class I / genetics
  • Genes, MHC Class I / physiology*
  • HIV Infections / genetics
  • HIV Infections / immunology
  • HIV Infections / metabolism
  • HIV Infections / virology*
  • HIV-1 / genetics*
  • Humans
  • nef Gene Products, Human Immunodeficiency Virus / genetics
  • nef Gene Products, Human Immunodeficiency Virus / metabolism*

Substances

  • nef Gene Products, Human Immunodeficiency Virus
  • nef protein, Human immunodeficiency virus 1