Purification, crystallization and preliminary X-ray diffraction analysis of pyridoxal kinase from Plasmodium falciparum (PfPdxK)

Acta Crystallogr F Struct Biol Commun. 2014 Nov;70(Pt 11):1550-5. doi: 10.1107/S2053230X14019864. Epub 2014 Oct 25.

Abstract

Pyridoxal kinases (PdxK) catalyze the phosphorylation of vitamin B6 precursors. Thus, these enzymes are an essential part of many metabolic processes in all organisms. The protozoan parasite Plasmodium falciparum (the main causative agent of Malaria tropica) possesses a unique de novo B6-biosynthesis pathway in addition to a interconversion pathway based on the activity of plasmodial PdxK (PfPdxK). The role of PdxK in B6 salvage has prompted previous authors to suggest PdxK as a promising target for structure-based antimalarial drug design. Here, the expression, purification, crystallization and preliminary X-ray diffraction analysis of PfPdxK are reported. PfPdxK crystals have been grown in space group P2₁, with unit-cell parameters a=52.7, b=62.0, c=93.7 Å, β=95°. A data set has been collected to 2 Å resolution and an initial molecular-replacement solution is described.

Keywords: Plasmodium falciparum; malaria; pyridoxal kinase; vitamin B6 biosynthesis and salvage.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Crystallization
  • Molecular Sequence Data
  • Plasmodium falciparum / enzymology*
  • Protein Structure, Secondary
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / genetics
  • Protozoan Proteins / isolation & purification*
  • Pyridoxal Kinase / chemistry*
  • Pyridoxal Kinase / genetics
  • Pyridoxal Kinase / isolation & purification*
  • X-Ray Diffraction

Substances

  • Protozoan Proteins
  • Pyridoxal Kinase