Characterization of a GH family 8 β-1,3-1,4-glucanase with distinctive broad substrate specificity from Paenibacillus sp. X4

Biotechnol Lett. 2015 Mar;37(3):643-55. doi: 10.1007/s10529-014-1724-x. Epub 2014 Nov 13.

Abstract

A β-1,3-1,4 glucanase gene of Paenibacillus sp. X4, bglc8H, was cloned and characterized. BGlc8H was predicted to be a protein of 409 amino acid residues, including a signal peptide of 31 amino acids. The mature enzyme was predicted to have 378 amino acid residues; its [corrected] molecular mass and pI were estimated as 41,561 Da and 7.61, respectively. BGlc8H belongs to glycoside hydrolase family 8 (GH8). Site-directed mutants of Glu95 and Asp156 of BGlc8H showed a near-complete loss of activity, indicating that they are catalytically-active residues. Unlike other GH8 members, BGlc8H had broad substrate specificity and hydrolyzed barley-β-D-glucan > chitosan > carboxymethyl-cellulose > and lichenan. BGlc8H had a lower ratio of lichenase/barley-β-D-glucanase activities compared to GH16 enzymes. BGlc8H was optimally active at pH 5 and 50 °C, except for barley-β-D-glucanase (40 °C) and chitosanase (pH 7) activities. BGlc8H hydrolyzed cello-oligosaccharides (G3-G6) to G3 and G2 but not to G1. Ca(2+) increased the activity and thermostability of BGlc8H for lichenan suggesting its use for the saccharification of cellulosic biomass.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution
  • Cloning, Molecular
  • Cluster Analysis
  • DNA Mutational Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Enzyme Stability
  • Gene Expression
  • Glycoside Hydrolases / chemistry
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / isolation & purification
  • Glycoside Hydrolases / metabolism*
  • Hydrogen-Ion Concentration
  • Isoelectric Point
  • Molecular Sequence Data
  • Molecular Weight
  • Mutagenesis, Site-Directed
  • Paenibacillus / classification
  • Paenibacillus / enzymology*
  • Paenibacillus / genetics
  • Paenibacillus / isolation & purification
  • Phylogeny
  • Point Mutation
  • Protein Sorting Signals
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Soil Microbiology
  • Substrate Specificity*
  • Temperature

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Protein Sorting Signals
  • RNA, Ribosomal, 16S
  • Glycoside Hydrolases
  • licheninase

Associated data

  • GENBANK/KF514662
  • GENBANK/KF528741