Single asparagine to arginine mutation allows PerR to switch from PerR box to fur box

ACS Chem Biol. 2015 Mar 20;10(3):682-6. doi: 10.1021/cb500783g. Epub 2014 Dec 11.

Abstract

Fur family proteins, ubiquitous in prokaryotes, play a pivotal role in microbial survival and virulence in most pathogens. Metalloregulators, such as Fur and PerR, regulate the transcription of genes connected to iron homeostasis and response to oxidative stress, respectively. In Bacillus subtilis, Fur and PerR bind with high affinity to DNA sequences differing at only two nucleotides. In addition to these differences in the PerR and Fur boxes, we identify in this study a residue located on the DNA binding motif of the Fur protein that is critical to discrimination between the two close DNA sequences. Interestingly, when this residue is introduced into PerR, it lowers the affinity of PerR for its own DNA target but confers to the protein the ability to interact strongly with the Fur DNA binding sequence. The present data show how two closely related proteins have distinct biological properties just by changing a single residue.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arginine / metabolism
  • Asparagine / metabolism
  • Bacillus subtilis / genetics*
  • Bacillus subtilis / metabolism
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Base Sequence
  • DNA, Bacterial / chemistry*
  • DNA, Bacterial / genetics
  • DNA, Bacterial / metabolism
  • Gene Expression Regulation, Bacterial*
  • Molecular Sequence Data
  • Mutation*
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Repressor Proteins / chemistry
  • Repressor Proteins / genetics*
  • Repressor Proteins / metabolism
  • Transcription, Genetic

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • Repressor Proteins
  • ferric uptake regulating proteins, bacterial
  • peroxide repressor proteins
  • Asparagine
  • Arginine