The complete sequence of the mitochondrial genome of Liangshan pig (Sus Scrofa)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4183-4184. doi: 10.3109/19401736.2014.1003903. Epub 2015 Jan 20.

Abstract

Liangshan pig is one of the famous native breeds in Sichuan province in China. It lives in the mountainous areas (about 1500-2500 m altitude) and has a superior meat quality. Here, the complete mitochondrial genome sequence of Liangshan pig was first reported. The total length of mitochondrial genome is 16,760 bp, including 34.62% A, 25.79% T, 26.20%, C and 13.39% G, with an A + T bias of 60.41%. Mitochondrial genome contains a major non-coding control region (D-Loop region), two ribosomal RNA genes, 13 protein-coding genes (PCGs), and 22 transfer RNA genes. The D-loop region is located between the tRNA-Pro and tRNA-Phe genes with a length of 1324 bp, some tandem repeat sequences was found in the region. The mitochondrial genome of Liangshan pig provides an important role in genetic mechanism.

Keywords: Genome composition; Liangshan pig; mitochondria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • China
  • Gene Order
  • Genome Size
  • Genome, Mitochondrial
  • Mitochondria / genetics*
  • Open Reading Frames
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA / methods*
  • Sus scrofa / genetics*

Substances

  • RNA, Ribosomal
  • RNA, Transfer