Mechanism of N-Acylthiourea-mediated activation of human histone deacetylase 8 (HDAC8) at molecular and cellular levels

J Biol Chem. 2015 Mar 6;290(10):6607-19. doi: 10.1074/jbc.M114.600627. Epub 2015 Jan 20.

Abstract

We reported previously that an N-acylthiourea derivative (TM-2-51) serves as a potent and isozyme-selective activator for human histone deacetylase 8 (HDAC8). To probe the molecular mechanism of the enzyme activation, we performed a detailed account of the steady-state kinetics, thermodynamics, molecular modeling, and cell biology studies. The steady-state kinetic data revealed that TM-2-51 binds to HDAC8 at two sites in a positive cooperative manner. Isothermal titration calorimetric and molecular modeling data conformed to the two-site binding model of the enzyme-activator complex. We evaluated the efficacy of TM-2-51 on SH-SY5Y and BE(2)-C neuroblastoma cells, wherein the HDAC8 expression has been correlated with cellular malignancy. Whereas TM-2-51 selectively induced cell growth inhibition and apoptosis in SH-SY5Y cells, it showed no such effects in BE(2)-C cells, and this discriminatory feature appears to be encoded in the p53 genotype of the above cells. Our mechanistic and cellular studies on HDAC8 activation have the potential to provide insight into the development of novel anticancer drugs.

Keywords: Calorimetry; Catalysis; Histone Deacetylase (HDAC); Neuroblastoma; p53.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Apoptosis / drug effects
  • Benzamides / administration & dosage
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Crystallography, X-Ray*
  • Enzyme Activation / genetics*
  • Gene Expression Regulation, Neoplastic
  • Histone Deacetylase Inhibitors / administration & dosage
  • Histone Deacetylases / biosynthesis*
  • Histone Deacetylases / chemistry
  • Histone Deacetylases / genetics
  • Humans
  • Kinetics
  • Models, Molecular
  • Neuroblastoma / drug therapy
  • Neuroblastoma / enzymology*
  • Neuroblastoma / genetics
  • Phenylthiourea / administration & dosage
  • Phenylthiourea / analogs & derivatives
  • Repressor Proteins / biosynthesis*
  • Repressor Proteins / chemistry
  • Repressor Proteins / genetics
  • Thermodynamics
  • Tumor Suppressor Protein p53 / biosynthesis

Substances

  • Benzamides
  • Histone Deacetylase Inhibitors
  • N-(phenylcarbothiol)benzamide
  • Repressor Proteins
  • TP53 protein, human
  • Tumor Suppressor Protein p53
  • Phenylthiourea
  • HDAC8 protein, human
  • Histone Deacetylases

Associated data

  • PDB/2V5W