Selective inhibition of protein arginine methyltransferase 5 blocks initiation and maintenance of B-cell transformation

Blood. 2015 Apr 16;125(16):2530-43. doi: 10.1182/blood-2014-12-619783. Epub 2015 Mar 5.

Abstract

Epigenetic events that are essential drivers of lymphocyte transformation remain incompletely characterized. We used models of Epstein-Barr virus (EBV)-induced B-cell transformation to document the relevance of protein arginine methyltransferase 5 (PRMT5) to regulation of epigenetic-repressive marks during lymphomagenesis. EBV(+) lymphomas and transformed cell lines exhibited abundant expression of PRMT5, a type II PRMT enzyme that promotes transcriptional silencing of target genes by methylating arginine residues on histone tails. PRMT5 expression was limited to EBV-transformed cells, not resting or activated B lymphocytes, validating it as an ideal therapeutic target. We developed a first-in-class, small-molecule PRMT5 inhibitor that blocked EBV-driven B-lymphocyte transformation and survival while leaving normal B cells unaffected. Inhibition of PRMT5 led to lost recruitment of a PRMT5/p65/HDAC3-repressive complex on the miR96 promoter, restored miR96 expression, and PRMT5 downregulation. RNA-sequencing and chromatin immunoprecipitation experiments identified several tumor suppressor genes, including the protein tyrosine phosphatase gene PTPROt, which became silenced during EBV-driven B-cell transformation. Enhanced PTPROt expression following PRMT5 inhibition led to dephosphorylation of kinases that regulate B-cell receptor signaling. We conclude that PRMT5 is critical to EBV-driven B-cell transformation and maintenance of the malignant phenotype, and that PRMT5 inhibition shows promise as a novel therapeutic approach for B-cell lymphomas.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • B-Lymphocytes / drug effects*
  • B-Lymphocytes / metabolism
  • B-Lymphocytes / virology
  • Blotting, Western
  • Cell Line, Transformed
  • Cell Transformation, Viral / drug effects*
  • Cell Transformation, Viral / genetics
  • Cells, Cultured
  • Enzyme Inhibitors / pharmacology*
  • Herpesvirus 4, Human / physiology
  • Histone Deacetylases / genetics
  • Histone Deacetylases / metabolism
  • Host-Pathogen Interactions / drug effects
  • Humans
  • Lymphoma / genetics
  • Lymphoma / metabolism
  • Lymphoma / virology
  • Mice, SCID
  • MicroRNAs / genetics
  • MicroRNAs / metabolism
  • Microscopy, Confocal
  • Protein-Arginine N-Methyltransferases / antagonists & inhibitors*
  • Protein-Arginine N-Methyltransferases / genetics
  • Protein-Arginine N-Methyltransferases / metabolism
  • RNA Interference
  • Receptor-Like Protein Tyrosine Phosphatases, Class 3 / genetics
  • Receptor-Like Protein Tyrosine Phosphatases, Class 3 / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Small Molecule Libraries / pharmacology
  • Transcription Factor RelA / genetics
  • Transcription Factor RelA / metabolism
  • Transcriptome / drug effects
  • Transcriptome / genetics
  • Tumor Suppressor Proteins / genetics
  • Tumor Suppressor Proteins / metabolism

Substances

  • Enzyme Inhibitors
  • MIRN96 microRNA, human
  • MicroRNAs
  • ST7 protein, human
  • Small Molecule Libraries
  • Transcription Factor RelA
  • Tumor Suppressor Proteins
  • PRMT5 protein, human
  • Protein-Arginine N-Methyltransferases
  • PTPRO protein, human
  • Receptor-Like Protein Tyrosine Phosphatases, Class 3
  • Histone Deacetylases
  • histone deacetylase 3

Associated data

  • PDB/1OR8